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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23171577, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRILFILLL LIVTQLSELQ AAAFSVRQNR FDEVPDLQTP APLATSTESS KKPEKATSGL  60
   61 LKKCLPCSDG IRCVPQIQCP AHVRMESHEK PQICDLPAGK FGYCCETGQN HTAPKPETSP 120
  121 KERRSGFPTI LSPAVLDEAR RNFEHLMHGV AQIPVRRGFP DFAHGLVFHS TAKDDLHNFA 180
  181 ISNSAIEQVM TTQLFGKKEQ VPVEDFITNN VPIKFTETPL AHHCQPPPVC GNIRSVYRSM 240
  241 DGTCNNPEPQ RSLWGAAGQP MERMLPPAYE DGIWTPRAHS SDGTPLLGAR KISRTLLSDV 300
  301 DRPHPKYNLM VMQFGQVLAH DISQTSSIRL EDGSLVQCCS PEGKVALSPQ QSHFACMPIH 360
  361 VEPDDEFFSA FGVRCLNFVR LSLVPSPDCQ LSYGKQLTKV THFVDASPVY GSSDEASRSL 420
  421 RAFRGGRLRM MNDFGRDLLP LTNDKKACPS EEAGKSCFHS GKSLLSNVFL IINSLITYLT 480
  481 RLGDGRTNQI ISLITLQILL AREHNRVAGA LHELNPSASD ETLFQEARRI VIAEMQHITY 540
  541 NEFLPIIIGP QQMKRFRLVP LHQGYSHDYN VNVNPAITNE FSGAAYRMGH SSVDGKFQIR 600
  601 QEHGRIDEVV NIPDVMFNPS RMRKREFYDD MLRTLYSQPM QQVDSSISQG LSRFLFRGDN 660
  661 PFGLDLAAIN IQRGRDQGLR SYNDYLELMG APKLHSFEQF PIEIAQKLSR VYRTPDDIDL 720
  721 WVGGLLEKAV EGGVVGVTFA EIIADQFARF KQGDRYYYEY DNGINPGAFN PLQLQEIRKV 780
  781 TLARLLCDNS DRLTLQAVPL AAFVRADHPG NQMIGCDDPN LPSVNLEAWR A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle