YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	beat-IIa-PA, FBp...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELQLCGDL SAGDLSEIPK MGHQRATDTG HRQIRSHRKS DCRTFPARCL LLLLGVLLLS  60
   61 MELVECALRN VNLIIEPPAV RRGQHVVLRC MYDLDGAPLY SAKFYRGQLE FYRYTPGEFP 120
  121 NTKVFPFPGI HVDVSSSNAT QVLLRNVGFG LSGNFSCEVT ADAPLFSTAT AVDTMQVVEL 180
  181 PEKRPQVFTE HTRYEPGDVL RANCSTPPSR PRAELTFTIN NMVITHVDTE YIRTIDNLIA 240
  241 TRISLKMQLQ GIHFSSVNPA IYNNVYGLNS VYGHGGPVYA PNSNPGGLLL RCSAQIGDLY 300
  301 QEYKEIELGT PQKDPVPARV TLSSDTSLKN FFSSYFSTSA SAASRLLPGV YMAPLIMAML 360
  361 ASLFRLIEAA FEPCDASSQD PQSQTGHSME HSKERREPKE RPALVSSCSV SKASRQQLAW 420
  421 PGSRTESLRL A

Type	Start	End	Confidence
Cytoplasmic	1	43	0.62
Transmembrane Helix	44	64	0.55
Non-Cytoplasmic	65	346	0.95
Transmembrane Helix	347	364	0.52
Cytoplasmic	365	431	0.53