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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4009-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFLVVLSV LSVAVATKCP YSAMEPSLSR SKRSSFDIRP GVSDGSLDAL IKEFMPKYNG  60
   61 NNVHNSWAEP SASQQPLRCG VPPRNCLNDT RNLHYRTLDG SCNNLLYPEF GIAVSRYRRL 120
  121 LPPRQVEQAP NARLISLSLY GEQTRNDRFR TMAAMQWGQF VAHDISQLST QGAPQDCCAE 180
  181 PRHPRCLPIN LPRGGPIAYH TGKTCLHFAR SVSDADAICP KVEEPQPEKL TVATAYLDLS 240
  241 SIYGNNPSQN RKVRLFKGGL LKTSYTNGQH WLPVSQNENG ECGAKSECYI VPDIRNRFSP 300
  301 TIALLQTLLV REHNRLAENL ALINPDHSDE RIFQEARKIN IAQFQKITYY DWLPLFVGRT 360
  361 YTYLNGLIYP VEPTEYVNDY DETVNPAAYA EFSAAAFRYA HTQIPGWFSL VAPNRRSNRT 420
  421 MRLSDFLDRT ETIRLLDTSD NFDALLRGLA TQLHKRSDGN IDREIKHYFN RKEFEEYGSD 480
  481 LKSIDIQRAR DFGLASYNDV REFCGLRRAV DWADFAHEIP GEKISLLRRL YATPDDVELG 540
  541 VGGTLEYHVP DALFGPTLLC VIGKQFLNTR RGDRFFFERE NEGGFSRAQL AEIRKVSLSS 600
  601 LFCSNANYLH LIQPNVFVFP NSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle