YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Glut3-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	48	0.99
Transmembrane Helix	49	73	0.82
Non-Cytoplasmic	74	91	0.93
Transmembrane Helix	92	114	0.89
Cytoplasmic	115	123	0.78
Transmembrane Helix	124	142	0.92
Non-Cytoplasmic	143	149	0.69
Transmembrane Helix	150	171	0.89
Cytoplasmic	172	179	0.89
Transmembrane Helix	180	200	0.90
Non-Cytoplasmic	201	207	0.66
Transmembrane Helix	208	226	0.87
Cytoplasmic	227	294	0.94
Transmembrane Helix	295	314	0.93
Non-Cytoplasmic	315	325	0.81
Transmembrane Helix	326	345	0.97
Cytoplasmic	346	352	0.89
Transmembrane Helix	353	372	0.95
Non-Cytoplasmic	373	384	0.73
Transmembrane Helix	385	409	0.89
Cytoplasmic	410	420	0.90
Transmembrane Helix	421	444	0.89
Non-Cytoplasmic	445	450	0.87
Transmembrane Helix	451	471	0.96
Cytoplasmic	472	507	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGGIQDAE PVEPPQSSRK SGTWFAKRPS EMPERHVERA PVRQKINNVG LYKATLYSNI  60
   61 GSFFFGIAVG WSGTAERSVM EQHSYSFQPT ELQWSGVCIL LTLGAALWCL PMGLMVRLLG 120
  121 CRRTILIQLL PNFLGWFLTV FARSVPMLYA GRFFLGMCGG AHCVVVPIYN AEISTTKKRG 180
  181 AMGVVFEGAC ICGVIYSFAM SLFLELRIIN FVNLGLLALG PLQILMPESP AYYVDHGNIP 240
  241 RAEDSLRFLR GQKYDTRREI DFLTRDPTES EREVRQGPLL GFKYKKVRRS LARSLAIALL 300
  301 QKLCGALIFI FYGLNMLDCL RIRREFGLIL CLGLILGFLA CFFLVDRLGR RPLLIFSSAG 360
  361 IVFVSIYLGL HFKVWMTMGL TVMSWIALFC IAIFVGCYTA GVGSLTWVLN AELLVRPMRP 420
  421 LGCSIVCAFN WLTAFFVICW FGSHGVKCQP YLFLLFAIIA SLILLFSLIY IPETKKLSSA 480
  481 KIQQRLGGLI NRPAVITFTS SSDSSNA