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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0306142, pxb-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKMLDMMEL SEAELFMFDC DDCSGTPLAP PPQFLIPPPP RPPALAEFTV VPQDCNEEQL  60
   61 AQQQWESDVC QAMPILDASL YSSQSLATSA MIAVFSLLLV LIVLISSLFV WKNKRKVQNL 120
  121 LPCKTPTRGP LNGAMPLGGG TLGSAHHHHH HGMYEDPDAH LGHHRPLVMH RHHHHQQLAH 180
  181 HHHYQQHHSE LLQGKSIHYP SGYPMTRSPP FLVSSSPGPD PYRSNDNVYE ELGPGRVDSD 240
  241 GESEPPLHSD DDFAEDELSL PGECSFQKET NLPAAAGATP YHERAAGSSS SGTGVAGVAG 300
  301 ATGSVATSAS LPQAVQERHS VLSSGSSMGQ DTSTATASSA SNNNHELASG SNNRRTGRTR 360
  361 QSRSSQDQDL NNSTSTADIA DLAPLYDNRS NLMSLGYVAR STAPQFYNTL EHEVERRNRI 420
  421 NAQLSKAPVP PLSTIYRERI RYPHASQQYP SSVASGLMAA TMRARTQPRV LDRRLAPHQH 480
  481 QHHRIHAAPM AQEPSYCYAE PMYNANYYYE SAGGARPYAS TLLPTAADYR HPYGDSSFGS 540
  541 DSGYSHHTPA SSIGRQDYDV AEPQVLTQPK PSKLSSALNF SWNRNSRSKG TSGGAIAKTS 600
  601 GNSSNSSATS PNNNSSACST VTSQLENNNT ASLSPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle