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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG12241-PA
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMARSIFGR DHEGYVGREE HTRKLQNLGS EDDLGELPPM MEELSVADGL RPNPGGPFSA  60
   61 LTASMWPQEI LAKLGGGAEL ASGPNDQPEY RFDEFGFRVE EEDGPEQSSN KLLSIPFVED 120
  121 AQQRLQWIAH LEFSHNKEAA ELSWEHVDVM LPRTEKLRNM VRQGIPHTLR AQMWMRLSGA 180
  181 LAKKQKSETS YHDIVKASSN DQLMTSKQIE KDLLRILPTN ACFSNPNGTG IPRLRRILRG 240
  241 IAWLFPDIGY CQGTGVIVAC LLLFMEEENA FWMMATIVED LLPASYYSST LLGIQADQRV 300
  301 MHTLIANYLS SVDESLRKHD IELSLITLHW FLTLFANVVH MKILVRIWDW FFYEGSIVLF 360
  361 QLTLGMLKVK EQDLKHLENS AQIFNSLSDI PGEVTDVEVL FRQALEVGGS LSQTVIDTHR 420
  421 RRHLAYLMAD QGHQIGNPEA APNLPKQQLA RRQVRKSKSI LEAFLFRGDG NEGDQLKNKN 480
  481 IRQTEILVDL REAILKVGRH FITIEPKLAG HIQLTANYST ESHAKDHENF INVARTRKRR 540
  541 AKALHDFERH DDDELGFRRN DIITIISQKD EHCWVGELNG LRGWFPAKFV ELLDERSKLY 600
  601 TSAGDDAISE TVTDLVRGTL APAIKAFLEH GMKRPTFLGG PIHPWLYIEE AATREVEKDF 660
  661 ESVYSRLVLC KTYRLDEDGK VLTPEELLYR CVQAINQTHD DAHAQMDVKL RSLICLGLNE 720
  721 QVLHLWLEVL CACQEVVQKW YHSWSFIDSP GWVQIKCELR ILSQFAFNLN PDWELPPKRG 780
  781 KESQPLKDGV RDMLVKHHLF SWDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle