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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: l(3)L1231-PA, FB...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCQQASRFH SATATATLAK STATRRIATA AAAATATAIA AATAAAAAAT LTPVESIAGK  60
   61 TTSEDSDPYA FTETVAVTPP ILFNAQKSRA RLTDSNRGSN KRQTAATAAA NRKANLVAQL 120
  121 SVTEAAKAQA SLASNNTTNF HHVTQSQRQS TALQLQLPLQ SQSQSQASPK RATNVCIVRP 180
  181 QQQQLEKIAT SESCQSPAAP PPLYAHTPSL WQTPLLIDNG QKQQLLQQQH QQPQQQQSVA 240
  241 IALVSPPTSP ASLPSPTLPP ATAAVTAMVA PISVSPKGGL PLPPSKFHHT TLAQHLQKVE 300
  301 CLKKKKSLPL ACQNNNNNSN LPNNNNVESL KKPVVQGTSY NQTHPPPLMV FNTGTVAVPA 360
  361 QSPQTAAPQK HSTGNSVDDS DLNEIPVNVI FRKPQEAGGA AKTGGPGGLS APVSGTPQTR 420
  421 PAEVKMVTPL TPPTPPEMSA PPLLAQMQPP QIPTSCVPAL APSFKVSSPA VLSPKVISPA 480
  481 PASPKLLCPT APASTNSLQI APKAVPATTT SSAPALATKS EQMSSKVANL NAFNRQAPIA 540
  541 SKGVRNGITN NNNNRNSNVV AKKSSPTSMP PPKDPIAPIA ANELTDSEHR QRRRKPASAC 600
  601 RRSLDTLSEN ESFSVDSPYC LQQHWLHSGF NNKSHDAPLS QSNRREDRIA VRKGALRRQA 660
  661 LQLLSTRSLQ ELPMRAAKQR LQCVQNMLIK YQDHAGQQQG IGIGNHCLVA SCKQPTLSMA 720
  721 AHCERHIVNN STQQLFQPCV AWRMDGTACQ APVFDVLHTL ALCKVHSHLR SGMDGARPAS 780
  781 KQPPVSLPVA GVATLYVPVK QQRKRKANTN AVARPQKRGR KPANEPIANQ ISSQINKLIP 840
  841 GAGMQRKSST TSLESIASNS QSSATSHSQP PYKPGNVLAA VPAAQNLSQR SIPPALAPLS 900
  901 SDFQPNHQQQ EPLLVPKLEV DSLFKFDADQ QQNQQQQSTL DPSLLSLDIA NIKAEEISQI 960
  961 VAQLAAAGGD LQNPNNNNNN NIGIHNNNSV HFNNNNNNSM NYSNNNNNSF PSFNTAFGNA1020
 1021 MGQPSNTITH NGHAVPAVLA NTADLLGQDM FGICENSSAY ASSEDTGLGG LSESELIGTN1080
 1081 DADDIALNGA HLLEEHDLVN VFDTLSDDAF NELFQSVQQA ECEAMDRALD RALQQTMGGS1140
 1141 ADSAFLNDFL DVGDDLLADA VMHSPNTSGI DAPPLFGDSS SGGGNSSSNG ASDIRGLVQT1200
 1201 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle