YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Cyp313a1-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTINLLLAV GALFWIYFLW SRRRLYFLML KIPGPIGLPI LGSSLENIIT YKRKLSFRTK  60
   61 YLNKYGSTIL TWMGPVPFIV TRDPKVVEDI FSSPDCHNKS QHIVNAITSC MGNGLLGKQD 120
  121 PHWLDRRKHF NPSFKQDLLL SFFHIFDAET KVLMNLLDTY VDKGEIDVVP EMLRWSFKIA 180
  181 AQTTMGSEVK HDEHFKNGSL VESFESLISH STLNILMPLV QNRMISKICG YDKLRADNFS 240
  241 RIQKMLDNVV NKKVNPLPKT DSDPESNIVI NRAMELYRKG DITYMDVKSE CCIMIAAGYD 300
  301 TSALTVYHAL FLLANHPEHQ EAVFEELNGV FPDAGHFGIT YPDMQKLDYL ERVIKETLRL 360
  361 IPAIPITARE TKNDVRLSNG VLIPKGVVIG IDMFHTHRNP EVWGPDADNF NPDNFLAENM 420
  421 EQKHPYAYIP FARGKRNCIG SKYAMMSSKF ALCRILRNYK ISTSTLYKDL VYVDNMTMKL 480
  481 AEYPRLKLQR RG

Type	Start	End	Confidence
Signal Peptide	1	21	0.58
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	492	0.92