YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0300511
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTPHPFGFL IILVPMTNAM RAIAAIAAGV GSVAATVATS TTSSISSSTT IINTSSATTI  60
   61 GGNHTSGSTG FSTNSTLLDA DHLPLQLTTA KVDLDIEIDI QLLTNGYDGT TLTSFYNESS 120
  121 WTNASEMDTI VGEEPEPLSL VSIVVVGIFL SVLIFLSVAG NILVCLAIYT ERSLRRIGNL 180
  181 FLASLAIADL FVASLVMTFA GVNDLLGYWI FGAQFCDTWV AFDVMCSTAS ILNLCAISMD 240
  241 RYIHIKDPLR YGRWVTRRVA VITIAAIWLL AAFVSFVPIS LGIHRPDQPL IFEDNGKKYP 300
  301 TCALDLTPTY AVVSSCISFY FPCVVMIGIY CRLYCYAQKH VKSIKAVTRP GEVAEKQRYK 360
  361 SIRRPKNQPK KFKVRNLHTH SSPYHVSDHK AAVTVGVIMG VFLICWVPFF CVNITAAFCK 420
  421 TCIGGQTFKI LTWLGYSNSA FNPIIYSIFN KEFRDAFKRI LTMRNPWCCA QDVGNIHPRN 480
  481 SDRFITDYAA KNVVVMNSGR SSAELEQVSA I

Type	Start	End	Confidence
Cytoplasmic	1	18	0.58
Transmembrane Helix	19	39	0.70
Non-Cytoplasmic	40	142	0.94
Transmembrane Helix	143	169	0.86
Cytoplasmic	170	179	0.83
Transmembrane Helix	180	201	0.93
Non-Cytoplasmic	202	218	0.87
Transmembrane Helix	219	239	0.92
Cytoplasmic	240	258	0.87
Transmembrane Helix	259	281	0.90
Non-Cytoplasmic	282	310	0.95
Transmembrane Helix	311	336	0.80
Cytoplasmic	337	391	0.97
Transmembrane Helix	392	417	0.80
Non-Cytoplasmic	418	429	0.79
Transmembrane Helix	430	449	0.73
Cytoplasmic	450	511	0.81