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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9297-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLTIWFLL GLTLIAVSNN VGFVNADVGP SESECRPYIE KAIHELKTDG VRDGSGELQS  60
   61 DQPRGDDDDD DDDEDAKSAN DLDGDGIPDD EDDDIDGDGI PNEKDDDIDG DGIPNDEDDD 120
  121 IDGDGIPNED DDDIDGDGVP NSKDEDIDGD GVPNSKDEDI DGDGKANHED DDLDGDGTPN 180
  181 HEDEDLDGDG VPNEEDDDLD GDGKINHEDE DLDGDGVKND EDEDLDGDGK VNHEDEDLDG 240
  241 DGVKNEKDDD LDGDGTNNSQ DEDLDGDGVP NEKDDDLDGD GILNEHDGDV DGDGVPNEHD 300
  301 HKDSGENADD DDDDDDEDDK EAVKKRSKRE VDAAPVLDIE APPSPAEEFP VEEEIVKEAS 360
  361 AEEEAEVEAV KEEEPEQEAV QEPEPEPVVE PEAEVQPEPV QQEEEKAESA EAKEEEKPAP 420
  421 VEEAEAEEES VQPEAAPKEP EAVQEEAQED EPQTDGAQDA ADDDDDTKPE DELLWEGHIP 480
  481 ENRRSRQHIT ELLQLDEEFN AREKATDNVA EIILRDIKRI YENAVKPLET LYKYRDLSNR 540
  541 HFSDPEIFSK PLILFMGPWS GGKSSILNYL TDNEYTPNSL RTGAEPSPAY FNILMWGNET 600
  601 EVLDGTQLAA DYTFAGLQKF GQGLEERLRG LKMKSKILEK VNIVEIPGIL EVRKQVSRVF 660
  661 PFNDACQWFI DRADIIFLVY DPAKLDVGPE TEAILDQLKG REYQTRIILN KADTVKPEEL 720
  721 LRVQGALIWN ISPLMSSAQP PLMYTTSLWT HPYQDGAPAR LLLAQERAFL RDLRTAIDKR 780
  781 IEHKIASARR FAVRVRNHAK MVDCYLNTFN NHKTLFGNKK RIADDIIDHP QNYHIYEGLS 840
  841 TLTNISRYDL PDPEVYRDFF RLNPLYEFKK LRDTCTYFRG CPITKLDLAI AYELPELAGK 900
  901 YKKMSEAALA AIEAQQQDGT IGQAEPKRTS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle