YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cht5-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRYIPLLLL GVLCSWPAAT VASDQASRIV CYFSNWAVYR TGIGRYGLED VPADLCTHII  60
   61 YSFIGVNDKS WDVLVIDPEL DVDQGGFSKF TQLKKSNPNV KLEIAVGGWA EGGSKYSQMV 120
  121 AVRDRRQSFI RSVVRFMKQY NFDGFDLDWE YPGATDRGGN YGDKDKFLYF VEELRRAFDR 180
  181 EGRGWEITMA VPVAKFRLNE GYHVPELCEA LDAIHAMTYD LRGNWAGFAD VHSPLYKRKH 240
  241 DQYAYEKLNV NDGLALWEEM GCPANKLVVG VPFYGRTFTL SNSNKNYNMG TYINKEAGGG 300
  301 APGPYTNASG FLAYYEICTE VMDKSKGWTV EWDDAGMVPY TYKDTQWVGY ENEASIQIKM 360
  361 DFIKQRGYAG AMTWAIDMDD FHGMCGRKNG LTQILYDNMK NYRVPEPTRQ TTPRPEWAKP 420
  421 PATPPNPDEG AVVAPTTSTT KRPKPKPKPT SSPLSPTSAP GPVPTVGSST PKPTTKKPKK 480
  481 PKKTTTTTTT TPAPEKSTEE PEEVVYPVDP VEPTDPEQPM GPQFDPNEID CTNRDFVPHP 540
  541 NCRKYFRCVH GKPVEFECKE GTAFHTVLNV CDWIENSDRY YCSRMKNKEK GNEAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle