YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311942, CG8...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHQERKSMW FFGGLASVGA AMVTHPLDLI KVTLQTQQGH LSVAQLIPKL AREQGVLVFY  60
   61 NGLSASVLRQ LTYSTARFGV YEAGKKYVNT DSFGGKVALA GASGLVGGIV GTPADMVNVR 120
  121 MQNDVKLPPQ QRRNYNNAFD GLVRVYRQEG FKRLFSGATA ATARGILMTI GQIAFYDQTK 180
  181 IYLLATPYFQ DNLVTHFTAS LVAGTIATTL TQPLDVLKTR SMNAKPGEFN GLWDIVKHTA 240
  241 KLGPLGFFKG YVPAFVRLGP HTIITFVFLE QLRLKFGTLN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.82
Transmembrane Helix	9	29	0.81
Non-Cytoplasmic	30	96	0.86
Transmembrane Helix	97	117	0.54
Cytoplasmic	118	153	0.66
Transmembrane Helix	154	175	0.61
Non-Cytoplasmic	176	192	0.90
Transmembrane Helix	193	214	0.58
Cytoplasmic	215	280	0.58