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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG32473-PC
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYAAKNVRPR SSLSTDDNHR IKDTNRPHKA RSNTILTLAA FCVFLLVLCG FLLGALVYVG  60
   61 KNIAEEHQRQ QHANASQWAL NSTIRTVYVD RDQLLSTKPI ISVLSDNRFY TTQVPTSKKS 120
  121 SIMATVAPAV KAASKVLQNL GFRLPKQIKP SKYRLHLRPD LERKNYSGNI SISLQVLEPI 180
  181 AFIPVHVKQL NVSTVEVKRL DESGAPLKDI TPTLTFAHPE FEYWVTEFEQ PLEAGNYSLL 240
  241 LNFTGSLVDR ITGMYQSSYL DKLKNRSRSI ISTKFEPTYA RQAFPCFDEP ALKAQFTITV 300
  301 ARPSGDEYHV LSNMPVASEY VDGDITEVTF AETVPMSTYL AAFVVSDFQY KETTVEGTSI 360
  361 ALKVYAPPAQ VEKTQYALDT AAGVMAYYIN YFNVSYALPK LDLVAIPDFV SGAMENWGLV 420
  421 TFRETALLYD ESTSSSVNKQ RVAIVVAHEL AHQWFGNLVT MNWWNDLWLN EGFASFLEYK 480
  481 GVKQMHPEWD MDNQFVIEEL HPVLTIDATL ASHPIVKSIE SPAEITEYFD TITYSKGAAL 540
  541 VRMLENLVGE EKLRNATTRY LVRHIYSTAT TEDYLTAVEE EEGLEFDVKQ IMQTWTEQMG 600
  601 LPVVEVEKSG STYKLTQKRF LANEDDYAAE AEASSFNYRW SIPITYTSSI NSEVQSLIFN 660
  661 HNDNEATITL PEEASWIKIN TNQVGYYRVN YGSEQWAELI SALKNSRETF STADRAHLLN 720
  721 DANTLAAAGQ LNYSVALDLI SYLESEQDYV PWSVGTSALA TLRNRVYYTD LYTNYTTYAR 780
  781 KLLTPIVEKV TFTVAADHLE NRLRIKVLSS ACSLGHESSL QQAVTLFNQW LASPETRPNP 840
  841 DIRDVVYYYG LQQVNTEAAW DQVWKLYLDE SDAQEKLKLM NCLTAVQVPW LLQRYINWAW 900
  901 DESNVRRQDY FTLLGYISTN PVGQSLVWDY VRENWEKLVD RFGINERTLG RLIPTITARF 960
  961 STETKLEEMQ QFFAKYPEAG AGTAARQQAL EAVKANIKWL AANKAQVGEW LANYVQQSSV1020
 1021 TNRIQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle