YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	hug-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGPSYCTLL LIAASCYILV CSHAKSLQGT SKLDLGNHIS AGSARGSLSP ASPALSEARQ  60
   61 KRAMGDYKEL TDIIDELEEN SLAQKASATM QVAAMPPQGQ EFDLDTMPPL TYYLLLQKLR 120
  121 QLQSNGEPAY RVRTPRLGRS IDSWRLLDAE GATGMAGGEE AIGGQFMQRM VKKSVPFKPR 180
  181 LGKRAQVCGG D

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	191	0.99