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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24646188, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGGRRCSEA ARRLRRRPDT LELSVLGGQP IETELQEDNE RTPTKGAGNV DEPGIEAPEA  60
   61 SCSAPSKRTR WFQFARSSKN RRKRLHCNED EDVKQPERRN SDLEGSPRAC LAQPEGMNIG 120
  121 SSTQTIATPL MIGDSFYSLA PGGGNPPPNK SDDQELYKQR DPSVTSESKS VPSLRRLSQI 180
  181 RRRRSSYYFS ENERRIRAND KEFNAQFKYH NNYIKTSKYS LFTFLPFNLL EQFQRLANFY 240
  241 FLCLLVLQLI PAISSLTPVT TAIPLIGVLT LTAVKDAYDD IVNNRKSKTL RNGKLVEAKW 300
  301 SEVQVGDVIR LDNNQFVAAD TLLLSTSEPN GLCFIETAEL DGETNLKAKQ CLTETIELGD 360
  361 RHDSLWNFNG EIICERPNNL LNKFDGTLIW RGQRFALDNE KILLRGCVLR NTQWCYGVVV 420
  421 FAGVDTKLMQ NSGKTQFKST GVDRLLNFII IGIVLFLVSI CALFAIGCAI WEGLIGQHFQ 480
  481 LYLPWEHIIP KDYIPTGATV IGLLVFFSYA IVLNTVVPIS LYVSVEVIRF VQSFLINWDE 540
  541 EMYYPTTNTY AKARTTTLNE ELGQIQYIFS DKTGTLTQNI MTFNKCSING RSYGDVIDLR 600
  601 TGELVEITEQ QTIFQNSNTN NRPSPLSGAI VAPPAAPPPI ILVHKAEVHA KKTSMVVTSS 660
  661 GEAQVLPDRP RSDIERSAPP MDASEKRPGL KHVRYSAPSR SQDADAGRLS PRLDGSGGLS 720
  721 PPVGNEERRI SGGFKRSGAG CMQRQLSRTS SCDKVKILHD SQQTETHNMH HSSHNRKRLV 780
  781 KIRFKKAPST ATLGVVISQL EHHLDEEPQS TSTLSTTKHH HHRSKAFATN WSSSPHRVHA 840
  841 LQSVDFSANP HHESDFRWYD RTLLDAVRSD EEHSHVFFRL LALCHTVMAE TVDGKLEYQA 900
  901 QSPDEAALVS AARNFGFVFR TRTPNSITIE VMGQTEEYEL LNILDFNNVR KRMSVILRRG 960
  961 DSMVLYCKGA DNVIYDRLHG GQEDLKARTQ DHLNKFAGEG LRTLALAERR LTEQYYNDWR1020
 1021 SRQQEAALSM DSREQKLNAI YEEIESEMQL VGVTAIEDKL QDGVPKSIAN LQNAGIKIWV1080
 1081 LTGDKQETAI NIGYSCQLLT DELADVFIVD GNSVEEVEKQ LRQFKESIKI YNRFRPGGFD1140
 1141 PFDRLNSDSN MDPLSVTMTQ TSAFMQETNL PPTPPPPPAI SVVTFRWDEK NKDNKGGPDS1200
 1201 AECNNLFGDE KGSEDGGTAS IVVDENTGFA LVVNGHSLVH CLSPELENKF LDIASQCKAV1260
 1261 ICCRVTPLQK ALVVELIKRA KNAVTLAIGD GANDVSMIKA AHIGVGISGQ EGLQAVLSSD1320
 1321 YSIAQFRYLE RLLLVHGRWS YYRMCKFLRY FFYKNFAFTL CHCWYSLFCG FSAQTVFDPM1380
 1381 FISVYNLFYT SLPVLALGVF EQDVSDKNSL EFPRLYTPGL KSELFNIREF IYSVLHGAFT1440
 1441 SLVLFLIPYG VYKDGVSANG FVVSDHMTLG AVVATILIVD NTAQISLYTS YWTVVNHVTI1500
 1501 WGSLVWYFVL DYFYNYVIGG PYVGSLTQAM KDLTFWVTML ITVMALVAPV LAYKFYLLDV1560
 1561 HPSLSDKIRQ KSLKKIHSRA SSDVRRTASS RRGRRSVRSG YAFAHQEGFG RLITSGKIMH1620
 1621 KLPQDFAFPL GLGTKKTQVL HNNLNSADGP NSKGNNVTGH HMVNNNTNMR HNQNQNHSSM1680
 1681 ADITADGRGN GGDDGRGSGG SDDMSPRAPC QDLDTINL

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