YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Tango9-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	4	0.96
Transmembrane Helix	5	25	0.90
Non-Cytoplasmic	26	42	0.88
Transmembrane Helix	43	64	0.91
Cytoplasmic	65	92	0.93
Transmembrane Helix	93	113	0.90
Non-Cytoplasmic	114	120	0.69
Transmembrane Helix	121	139	0.92
Cytoplasmic	140	146	0.68
Transmembrane Helix	147	166	0.64
Non-Cytoplasmic	167	182	0.62
Transmembrane Helix	183	201	0.57
Cytoplasmic	202	218	0.79
Transmembrane Helix	219	241	0.87
Non-Cytoplasmic	242	262	0.82
Transmembrane Helix	263	288	0.84
Cytoplasmic	289	300	0.67
Transmembrane Helix	301	320	0.74
Non-Cytoplasmic	321	324	0.58
Transmembrane Helix	325	346	0.82
Cytoplasmic	347	381	0.86

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHRVFLSLI FVLSGTFNVL VVKWANQQQV IGSDGKLHGF QHPVVFTLLM FLGEFLCFAV  60
   61 FKVIRLISNR RGVISDLDSI LSQDSSEFRP VSMLLPTLLD AAASILLFTG LYLTYATSFQ 120
  121 MIRGAALIFV GIFSTMFLNH TLTGRHWLAI FTISCGLLDI ISLDVHRVEY DLVTLPYTDY 180
  181 KSILTGDLLI IIAEILHGLQ YVCEEKQLKT SNVAPLQAAG WQGIFGLGIT SMLAICMNFL 240
  241 PSIDPFSCSS RAVFDDWGDL FAALQGSISL IMTLIAFTIS CAMYNFIGLY IAMYSSSANR 300
  301 LLADGLRVYF IWVFVIIMEW EYMNLVTIMG FLILQMGIIL YRQALFLDWY RAAVARWYRA 360
  361 RYVDLGTENA AAPNSRPADV I