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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31116-PD
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYFGDRQRD RNRDRSNQKV ERIIHDEEFG EENVELVDSE WADFEKFICQ LRKRRNSAMS  60
   61 MEEELRHVQR HPKIKSHAFY PCPPPAENAR DSDSSDDDDP IGYIDTLMYG RYTKDLGEFA 120
  121 KDEARKLKIL EKRRKQEDKQ RNKELLGKHS TRAKRVSSWI WRHTVARLGE DWVFLALLGI 180
  181 IMALLSFIMD KGISICTNAR IWLYRDLTSQ PFVQYIAWVS LPVCLILFSA GFVHLIAPQS 240
  241 IGSGIPEMKT ILRGVQLKEY LTFKTLVAKV IGLTATLGSG MPLGKEGPFV HIASIVAQLL 300
  301 SKLVTSFQGI YENESRNSEM LAAACAVGVG ACFAAPVGGV LFSIEVTTTY FAVRNYWRGF 360
  361 FAAVCGATVF RLLAVWFQNA DTVRALFLTN FTTEFPFDPQ ELFVFALIGL VCGLGGASYV 420
  421 WVHRRYVLFM RSNKRMNKFL QKNRFLYPGF LALLVSSISF PLGTGQFLAG ELSTHEQVTQ 480
  481 LFSNFTWSRD DLTVEQAAVV THWMTSYTSV FGNLVIYTLF TFVVSIIAST IPVPSGMFIP 540
  541 VFKIGAGFGR LVGEFMAVTF PHGVRYGGRL SPIMPGGYAV VGAAAFSGSV THTVSVAVII 600
  601 FEMTGQITHV VPVMIAVLVA NAVAALLQPS IYDSIILIKK LPYLPDLLPS SSGMYSIFVE 660
  661 DFMVRDVKYI WHGISYQKLK EVLKLNKTLR SLPLVDSPDN MILLGSVQRY ELIKMIEKHI 720
  721 GREKRMEVAQ KWQKEAQERA LEEEKKKQEV ELKMRRPSRF EVLPAPDILS LRQIANDEML 780
  781 PPKKRAETMH GSLAPRKSIL KKTNSFNLKT YAQPMGHSPS ITPYTTITGN SEFRIRSAFE 840
  841 AIFKKSTTLQ DVQPDPETGS LSPAASNHEV EVPRTPSTPG VSKKVQLPAQ SNWDFVTDQI 900
  901 MLQVNPISTE SNKMPAEKDF TDKALSNNGD SSKQSPSIKF KANKVADVNR SPQTAKRCSK 960
  961 IRFANEVGVN GSPTRTKCKI KPENVLGYSI EDVDETTNPE SLAESIQKPK SVRLPRERVI1020
 1021 DMSPEDQKQW ELEEMLKPID LQKANVHIDP SPFQLVERTS ILKVHSLFSM VGINHAYVTK1080
 1081 IGRLVGVVGL KELRKAIEDI NSNSFVPPTR DEDADEKPAV EKPLLSTNSS DKAVDMTVTS1140
 1141 MDSALSNSEN CSDIEMEHIK HTDKGTVSLT MPPQESKQSP SADKSNTENG NHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle