YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG6672-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPLSHKDRS SLGYRIREKL NSWKRLIFSD RNSRNLFLFL LLNLSFAFVE LFYGIVTNSL  60
   61 GLISDSFHMF FDCTGLLAGL AASVITKWKA NDKFSYGYVR AEVLAGFVNS LFLLFIAFFI 120
  121 LSEGVERLIE PPEVKHERLF VVSVLGLLVN LVGIYAFNHG GHGHSHGGHG HSHGGGHGHG 180
  181 HSHGHTDAGN HNHQAITLDN GHGHSHDHDS HGHSHGDMSG SNSQIMRGVF LHILADTLGS 240
  241 VGVIISAVLM HMFGWMIADP ICSIFIALLI ALSVLSLIKE SIMILMQRQP ADLDRSLPQC 300
  301 YQKVTGLAGV YAVQEPHFWT LCSDVYVGAL KLEVSKNVDP KYVVTHTRMI FEAVGVKQIY 360
  361 IQLDYV

Type	Start	End	Confidence
Cytoplasmic	1	34	0.98
Transmembrane Helix	35	56	0.93
Non-Cytoplasmic	57	66	0.85
Transmembrane Helix	67	88	0.89
Cytoplasmic	89	97	0.89
Transmembrane Helix	98	121	0.86
Non-Cytoplasmic	122	138	0.88
Transmembrane Helix	139	159	0.93
Cytoplasmic	160	227	0.97
Transmembrane Helix	228	250	0.91
Non-Cytoplasmic	251	256	0.73
Transmembrane Helix	257	278	0.93
Cytoplasmic	279	366	0.97