YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ugt86Dj-PA
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.44
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPPGRWLLP MFWLISNSIC WIRSSRILVI APFESHSQCM LVTPYIQALK DRGHQLTVIH  60
   61 AYKHCMHKIE DVTFIRIWYN NNVFLEFEES VGIASANNKW EEISSMSSLM ANATLNVLNN 120
  121 VEVRALMKSR ITFDAVVLEA GYSDVLYGMA AHFSAQLIGI CTCVADWNIN NLVGFSTSTL 180
  181 TEPIMPFRAK YVKNVWDRIY NWLYTTEEWL LINLVFLPKQ RLIHDHFFGH LEKSFHEIRQ 240
  241 DFALMLLNQH FSLFRARPNV PGMVEVAGLH IPKEDPQLPS DLQVFIDEAE HGVILFSLGL 300
  301 EQDSKDLPRK TQEILVETFK SVPQRVIWKF DGESTMSLGT DIYHSKLLPQ QAILAHPNVK 360
  361 LFISHCGMMS VIEAAYYAKP VLGLPSFFDQ FRNLEIMKEE GVALELNINS LTVKELKDAI 420
  421 HSMINEPEYR ESALAISQRF RDQPIHPLDA AIYWTEYIIR YKGADHMKIS QSQLKLFDYY 480
  481 SLDNFIMVGS RLSLVVALVF LVLSKSRRWL NHLSTSAKSF LPTKHLIRS

Type	Start	End	Confidence
Signal Peptide	1	20	0.54
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	481	0.96
Transmembrane Helix	482	503	0.73
Cytoplasmic	504	529	0.77