YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG6629-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTCRSLARG LNICSPQLRH LLAQKPFNSA RLLATKAPKD HKASGPTTIG PSGDILVPPV  60
   61 TLKVIPFRMP PDLPYDDRNM LLGRQLSPHL SIYKIQLTST LSAFLRISGF VLAVFVWFVG 120
  121 ISGLCLQGDM EGFIKKVEKC DCHGMVTMAK VMVTMPFAYH TVAGTRHLIW YLNKFLTIPE 180
  181 IYATGYVAVA LTIALSAFLL AVKVGEKVKE EVVDLTKTKK GQKAKKEAPK DAKKDAPKDT 240
  241 KKEPKKDAKD KKKDEEGKSA K

Type	Start	End	Confidence
Cytoplasmic	1	102	0.58
Transmembrane Helix	103	124	0.88
Non-Cytoplasmic	125	180	0.62
Transmembrane Helix	181	202	0.90
Cytoplasmic	203	261	0.91