YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14694-PA
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	46	0.52
Transmembrane Helix	47	69	0.75
Cytoplasmic	70	73	0.60
Transmembrane Helix	74	95	0.81
Non-Cytoplasmic	96	102	0.43
Transmembrane Helix	103	119	0.42
Cytoplasmic	120	138	0.62
Transmembrane Helix	139	155	0.83
Non-Cytoplasmic	156	163	0.65
Transmembrane Helix	164	182	0.89
Cytoplasmic	183	244	0.93
Transmembrane Helix	245	266	0.86
Non-Cytoplasmic	267	283	0.83
Transmembrane Helix	284	306	0.88
Cytoplasmic	307	313	0.86
Transmembrane Helix	314	334	0.92
Non-Cytoplasmic	335	341	0.74
Transmembrane Helix	342	361	0.92
Cytoplasmic	362	371	0.78
Transmembrane Helix	372	395	0.91
Non-Cytoplasmic	396	411	0.91
Transmembrane Helix	412	433	0.95
Cytoplasmic	434	446	0.94

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESWLKISCL LCIFGFLREL RPSEPYHAEI LMGEWYHVTQ DEVNRSVYPV GTYSYLALLI  60
   61 FVFLITDLLR YKPVIIANAT TGICIWGTLI WTTTLSGLQA VEVFYGFYQA GEVAYYSYIY 120
  121 AKVDKQYYPR VTSHTRAAMF VGKLVAGILA QMVIGMRWMN YKQLFYITVT SQVAALLWAF 180
  181 FLPKVEKSLY FHNRSEAIEG GTKSDGGNLE KGSEQPSNEE ASQEKKIPAL QLLWSHFRSA 240
  241 YTNPLVIQWS LWYAISLAGF LQITTYMQVV WKSFENEPTI AWNGAVDVAL TLLSAVFALL 300
  301 AGYFHAGRLN TRSSLLSMAL LSVLEGGCVL LSCWTDDIYL SYLGYVLYGG LFAFTITVAS 360
  361 SELASSLEED SFALVFGFNT FVGLLLQCIL TFVVVSEKAN LNLNVFQQFS VYAFYFIVIG 420
  421 IVYSIAVILQ YIWSISKKPK AIQEAN