YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14691-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	23	0.95
Transmembrane Helix	24	46	0.89
Non-Cytoplasmic	47	68	0.86
Transmembrane Helix	69	89	0.92
Cytoplasmic	90	96	0.86
Transmembrane Helix	97	116	0.90
Non-Cytoplasmic	117	125	0.65
Transmembrane Helix	126	144	0.96
Cytoplasmic	145	153	0.85
Transmembrane Helix	154	177	0.91
Non-Cytoplasmic	178	193	0.88
Transmembrane Helix	194	215	0.94
Cytoplasmic	216	302	0.97
Transmembrane Helix	303	326	0.70
Non-Cytoplasmic	327	379	0.83
Transmembrane Helix	380	398	0.94
Cytoplasmic	399	406	0.66
Transmembrane Helix	407	427	0.90
Non-Cytoplasmic	428	435	0.64
Transmembrane Helix	436	457	0.92
Cytoplasmic	458	464	0.65
Transmembrane Helix	465	487	0.80
Non-Cytoplasmic	488	493	0.62
Transmembrane Helix	494	513	0.94
Cytoplasmic	514	522	0.76

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRAKDNTD EPADFETAIA ECGFGLFNVF ILCSAVPCLT AMVFSASALS YVMPSAECDL  60
   61 DLSIVDKGML HAVTYAGMII SAVPWGFIAD TIGRRPVLIS GGWLDGFFVL CASLSQNTAQ 120
  121 LMAFKFFDGL IICGPFAVVV SYLAEFHGKK HRPYIMLFVG LCVSIGSMIL PLLSYLLLPV 180
  181 PILFTVSSMK FRTWQVFLAV SSAPSLLSGF LHIFLPESPK FLMSQGNYKK ALDSLQRIYK 240
  241 LNKRKSRESY PIKHLTDPTP DRSDDLDGTG RPSTLQERFS RAQSKFIDGF KQLKPMFSSP 300
  301 YLAISLQVYC LHFCQIMCVN SVRLWLPQIF ATMNAMDTLG ANDTSMCAVL EHNANAKSMD 360
  361 EEEKRVECAL HHDPDSYLNN ITVAGIGLVG FLIIFPLMRF QVVSNHILKV FLFICIFLVG 420
  421 SLYFVKTSLV TMMVSAVYLT MMGICATTII GMSVVIFPTL MRTMVLLLIM TFGRLGSVSG 480
  481 NMLLPVFMQL SCLAPFLWLC SLMSIAFLFS LFLKVDDEQS LN