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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3999-PA, FBpp0...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRFLGRSSQ SLLLRCGHRY LATTPVEEVI FPTKSDFPSR HIGPRKTDVV AMLDTLGFKS  60
   61 LAELTEKAVP QSIQLKRELD LDKPLNEHEL IRRIRDISLK NQLWRSYIGM GYHNCHVPHT 120
  121 IIRNMFENPG WTTQYTPYQP EIAQGRLESL LNYQTLVTDL TGLDVANASL LDEGTAAAEA 180
  181 MCLATRHNKR KKLYLSNRVH PQTLSVVKTR TEALELEIVV GPIEQADLPS RELAGILLQY 240
  241 PDTYGDVKDF EDIAALAKKN GTLVVVATDL LSLTLLRPPA EFGADIAVGT SQRLGVPLGY 300
  301 GGPHAGFFAC KQSLVRLMPG RMIGVTRDMD GNDAYRLALQ TREQHIRRDK ATSNICTAQA 360
  361 LLANMSAMYA IYHGPEGLKA MANRIHHFTL TLQTGVLGAG HEVINKNFFD TLHIRLGGGQ 420
  421 SLEDLKERAE HKRINLRYLE DDTVGVALDE TVSVADVDDL LWVFKAEASV EHILARKDVL 480
  481 KNSIENSKFL RTSPYLQHPI FQSYHSESRM VRYMKKLENK DISLVHSMIP LGSCTMKLNS 540
  541 TTEMMPCSFR HFTDIHPFAP VEQAQGFHQM FKELEHDLCE ITGYDRISFQ PNSGAQGEYA 600
  601 GLRAIRSYHE HRNEGHRNIC LIPISAHGTN PASAQMAGMK VEPIRILSNG SIDMAHLRAK 660
  661 AEEHAHELSC LMITYPSTMG VFEETVADIC TLIHKHGGQV YLDGANMNAQ VGLCRPGDYG 720
  721 SDVSHLNLHK TFCIPHGGGG PGMGPIGVKA HLAPYLPGHP VVSPLSSEEH SFGVVSAAPF 780
  781 GSSAILPISW SYIKLMGSRG LKRATQVAIL NANYMSKRLE QHYKTLYKAP NSQLVAHEFI 840
  841 LDIRDLKKSA NIEAVDVAKR LMDYGFHAPT MSWPVAGTLM IEPTESEDKE ELDRFCDAMI 900
  901 SIREEIAEIE AGRMDKAVNP LKMSPHTQAQ VISDKWDRPY TREQAAFPAI FVKPDAKIWP 960
  961 TVGRIDDAYG DKHLVCTCPP ILPDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle