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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Best1-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTITYTGEVA TCRGFGCFLK LLLRWRGSIY KLVWLDLLAF LTIYYAINMV YRFGLNPAQK  60
   61 ETFEAIVQYC DSYRELIPLS FVLGFYVSIV MTRWWNQYTS IPWPDPIAVF VSSNVHGQDE 120
  121 RGRMMRRTIM RYVCLCLTMV LANVSPRVKK RFPGLNNLVE AGLLNDNEKT IIETMNKAFP 180
  181 RPSKHWLPIV WAASIITRAR KEGRIRDDFA VKTIIDELNK FRGQCGLLIS YDTISVPLVY 240
  241 TQVVTLAVYS YFLTCCMGQQ WTDGKVVGNT TYLNKVDLYF PVFTTLQFFF YMGWLKVAES 300
  301 LINPFGEDDD DFEVNWMVDR NLQVSYLIVD EMHHDHPELL KDQYWDEVFP NELPYTIAAE 360
  361 RFRENHPEPS TAKIEVPKNA AMPSTMSSVR IDEMADDASG IHFSAGNGKM RLDSSPSLVS 420
  421 VSGTLSRVNT VASALKRFLS RDDSRPGSAT PSQDQPYKFP ASASSASLSG AVVGSATSAG 480
  481 KPAGSLRITQ QVIEEVDEQA TITSMRANDP RPNVMDIFAQ TSSGAGTSGP LQPPPAHSEP 540
  541 VDIPSRPPSY NRAQSQYEPN LFPPGGVDAL LSTSAPAGGS PLLLSNAATA PSSPVGESSK 600
  601 SLYDPQKGAS RETVESMDLR SSTDLLGDAA VQPEDEGDDF DKLKAEREKE KLMRQQKNLA 660
  661 RTISTAPGME ATAVPMVPMV PVNVAVQQAQ LQPVASSADL LAGGDQFSNS TMKSEDAING 720
  721 S

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