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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: knk-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSSRVLCL RLQHHLLLVI LTIFLLCPAA SAQNEEEDGP YRGKYLGKLN SYHHQVSGDV  60
   61 YAVNEYTFLI VGFNYDGNGA DTFFWSGASN RPGPQGFIVP DEYGKTNILD RYHNKDFTLT 120
  121 LPDRKKITEI KWLAVYDLSS QNNFGDVYIP EEFDPPMSQL GGTFSKRSHN VSSSSVEILD 180
  181 SKTIRIKDFT YDGRGKRTFF WTGVGPQPSS RGSKLPDERG YLDPIRQYNK ETIELELPGD 240
  241 KTIFDIDWIS VYDVADNENY GHVLFNDKLN VPPSLVKVTP FEFSLPNCRQ LHKDMQVSWE 300
  301 VFGPQITFQL SGQVGGNDYM SFGISGSDVS SQMIGSDVVV AYIDDIRGYT VDYNITSLAP 360
  361 CVQVLGQNKG VCRDDVVGGL DSFQLNTYSR KDGINTISFR RTLKSSDDGD KEIFLDRSNY 420
  421 VIWAFGPLDS NNEPAFHTYY PKSDIVIDFN TTEPVNDCFA FTKRAETTNP PVWERTRITD 480
  481 ATVRTFNAYL GPSGGLRGYQ GLTNHVSSGL AWYINGYMIP ELYLKRGLTY TFKVRGGNNP 540
  541 HSPEHYHPLV ITDDPQGGYD RLSDAKQSEI RVLAGVEFTR RGRPKPTAAG PLCLSRYPQN 600
  601 SDRRLDDNFP TFKKFNRSLI TECVEGEPAL LEITPNITWP DTVYYNSFTH GNMGWKIHIV 660
  661 DSYTNLKSGS MGLSWSLCII LLPWLVLQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle