YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310764, FBp...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.73
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLIALSLIV CCSVSFSWAN EWGYPDLDNN QDEPFPKWGG LCDSGKKQSP INLHVKGALK  60
   61 GEFDALKFEN YDEHQKNLRM VNNGHSIQLS GFDHELTLSG GALLQDFVVE QIHMHWWSEH 120
  121 TINDIRYPLE VHIVHRNTIY PNMTMAANFK DGIVVIGVLY HVSNTPNEAI GSIIKSLGAV 180
  181 KSYDSMNKPV LVADSLAVDD LVPSVENYFT YAGSLTTPTC AEAVTWIVLT ETFPVTLDQV 240
  241 NEFKEIEYDE GKQLHNNYRE LQSENNRAVV LVEQPEQRSG SAGLTASVSL GLMTLILAGQ 300
  301 KFLL

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	281	0.99
Transmembrane Helix	282	299	0.72
Cytoplasmic	300	304	0.49