YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5361-PA
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTTQQTKEI CEIIRLKSTQ VFLVAGTCLI TVMVTLLCIG FMTRYEVEND VANVADVDYW  60
   61 KDKVATSQKI WYDKGIDELN EALRPQDLTY PKNVRIFVIQ GIDGRDWAAF RFPTSDASRG 120
  121 NTNFIWDRFP HLARLKNSCS QQFPCQVASV SRALWLGIPL DKVPDNQQDC GRLFNATQGP 180
  181 ISILRQAQLA GLRTGFVTTQ RITGPTGAAL GNANGNFECD ESMPLNSIKS GCQDIAQQLI 240
  241 SDETGKFLNV LIGGGRQMLS SLVPNTKYDP VDEMLCESND GRNLLKDWRN QKLKESKINR 300
  301 IIFDLIQRRD ELESLNSSSF DYLMGVMANG DLSGNSKAPS LKLMVDKSLN VLTKYKQGYL 360
  361 LIVEQFIPSG IDKREQLQLL NDTLVNLHKD QDTLTLVLMT NAIYPKPSLD VSEETETISL 420
  421 LPEIFNEAES EIQKRLHQMP SESLLFAQGE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.92
Transmembrane Helix	21	43	0.90
Non-Cytoplasmic	44	450	0.99