YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9393-PA
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMQLGAMLY VYKGEYGLPS IDFECLRALC LLRFTRCPMD VQTSSNPLRS GAGKLPYLQI  60
   61 GNQKFAGYRQ IKRVLDLEGY PIDAHLSTKQ KHLSTAYANW VFTNLHAYYH YFLFGEPHNF 120
  121 DTTTRGLYAK RTPFPFNFYY PSSYQREACD VVQVMAGFDV NDKLDKHEGD YLVVNAKKVV 180
  181 NLLSRKLGRK VWFFGDTYSE FDAIVYSYLA IIFKIALPNN PLQNHIKGCQ NLVNFINRIT 240
  241 KDIFRIEGYS SVKLTKTPSG TEASLTASER KFLDSELNTK IVAGVGAVLA MGAFAAWRGI 300
  301 YNQLTTRSST DYDGIDYEDD EMEEGLD

Type	Start	End	Confidence
Non-Cytoplasmic	1	280	0.57
Transmembrane Helix	281	301	0.75
Cytoplasmic	302	327	0.41