YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Or85f-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPVQYSYED FARLPTTVFW IMGYDMLGVP KTRSRRILYW IYRFLCLASH GVCVGVMVFR  60
   61 MVEAKTIDNV SLIMRYATLV TYIINSDTKF ATVLQRSAIQ SLNSKLAELY PKTTLDRIYH 120
  121 RVNDHYWTKS FVYLVIIYIG SSIMVVIGPI ITSIIAYFTH NVFTYMHCYP YFLYDPEKDP 180
  181 VWIYISIYAL EWLHSTQMVI SNIGADIWLL YFQVQINLHF RGIIRSLADH KPSVKHDQED 240
  241 RKFIAKIVDK QVHLVSLQND LNGIFGKSLL LSLLTTAAVI CTVAVYTLIQ GPTLEGFTYV 300
  301 IFIGTSVMQV YLVCYYGQQV LDLSGEVAHA VYNHDFHDAS IAYKRYLLII IIRAQQPVEL 360
  361 NAMGYLSISL DTFKQLMSVS YRVITMLMQM IQ

Type	Start	End	Confidence
Cytoplasmic	1	38	0.76
Transmembrane Helix	39	61	0.85
Non-Cytoplasmic	62	71	0.67
Transmembrane Helix	72	86	0.47
Cytoplasmic	87	130	0.63
Transmembrane Helix	131	157	0.86
Non-Cytoplasmic	158	191	0.64
Transmembrane Helix	192	212	0.61
Cytoplasmic	213	268	0.85
Transmembrane Helix	269	289	0.93
Non-Cytoplasmic	290	295	0.78
Transmembrane Helix	296	316	0.84
Cytoplasmic	317	392	0.81