YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG16736-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVYVGLLIK TTAQLLSHPM ELVRVNMQAN VIHHSRLSIN HMFRLMARHG LPGFYYGIVA  60
   61 ACLRCTVHTM STYTLFYNLQ DNKYVLMLQP YNTSMVLGIT GFWGGVLATP FAKLAVIRQA 120
  121 DLTRGSYERR NYRNFWRGLK CMYAKGGFTY LFTGWKINSI SSTAVAVLYT PISDKVHTVI 180
  181 SWFHRLDEPW LSDLITMALT GSIITVIMTP VDALATLTLN ESSHYGRTSY PYLYRKIIRK 240
  241 HGYKGFFFGW KPALMALIPH TVLATFVYRF LLDRYIT

Type	Start	End	Confidence
Cytoplasmic	1	51	0.95
Transmembrane Helix	52	72	0.89
Non-Cytoplasmic	73	94	0.86
Transmembrane Helix	95	117	0.88
Cytoplasmic	118	189	0.69
Transmembrane Helix	190	215	0.76
Non-Cytoplasmic	216	251	0.58
Transmembrane Helix	252	272	0.85
Cytoplasmic	273	277	0.60