YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0293880
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	142	0.98
Transmembrane Helix	143	164	0.94
Non-Cytoplasmic	165	184	0.90
Transmembrane Helix	185	203	0.94
Cytoplasmic	204	221	0.82
Transmembrane Helix	222	244	0.85
Non-Cytoplasmic	245	248	0.64
Transmembrane Helix	249	268	0.75
Cytoplasmic	269	333	0.86
Transmembrane Helix	334	353	0.93
Non-Cytoplasmic	354	373	0.93
Transmembrane Helix	374	397	0.87
Cytoplasmic	398	454	0.93
Transmembrane Helix	455	472	0.90
Non-Cytoplasmic	473	481	0.61
Transmembrane Helix	482	502	0.93
Cytoplasmic	503	511	0.82
Transmembrane Helix	512	531	0.94
Non-Cytoplasmic	532	559	0.91

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAERQEKRG EEETQPRLPD LGFVRDKLQK FQSKMLTDFE QRLSCMVEDV LQDLRQRELR  60
   61 AHEFPNFERS DRKSTWHNRV TSQAPADVSD STNGHANGTH PRPPIQSETS ARKQRRQLPE 120
  121 KVFVARESYL TALLQVEHMR TIYHIFYIIL VMFLLNVICY DYFVDGRFDL GLGTFRGGLR 180
  181 RLHWVMGVWL LEHVFVLALY FAFRGWALVR HKLKPHSSLQ RFWSHSCLIL YISSQLVFCF 240
  241 VSTSLCLKFN LPFVSACILL LESTRLLMKM HAFVRYNAER VLNGKAKKED AEEEKEGSER 300
  301 PFVPPLSCYT YFLFAPTLIY RDSYPRTSHI RWKFALNRLL EVVAIAFLYA FIHERHIHEH 360
  361 FGQYGLEPMG PSQLILKLFG MMLPSAVIFL CGFYLILHSW LNFTSELLRF GDRMFYKDWW 420
  421 TSHTYDGYYR NWNVVVHDWL YEYVYKDMYT HVFRGSKVAA SLAVFMISAV VHEQVLGFAL 480
  481 QMFFPVMFFF FGVVGVALVF LMRSAPKVMG NIFLWFSLIL GNATLISLYA MEHYALKNCN 540
  541 LSNESWTYRL LPAVWRCYN