YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220957234, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHGSDDSTS TAKSCPMIMV FHAGHCERIL WRGWVASTVT EFVLSALAIF LVSFLYEALK  60
   61 FLRQQLARRE ARRASEQLAA EQRRKNEAPA AGGCCSEAPL AEPREQTYWQ RLFASSHIVQ 120
  121 SLLNLLQIVI SYLLMLIFMT FNYWLCLAVI LGLGLGYFFF GWNKKNPDES ECCP

Type	Start	End	Confidence
Non-Cytoplasmic	1	37	0.66
Transmembrane Helix	38	59	0.84
Cytoplasmic	60	112	0.78
Transmembrane Helix	113	136	0.71
Non-Cytoplasmic	137	140	0.53
Transmembrane Helix	141	161	0.90
Cytoplasmic	162	174	0.73