YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11035-PA
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQHSPMLWR PLLLLRGLYL SQRHQMSHYD ALGIRRQCTQ NEIKAAYYKL SMLYHPDRNQ  60
   61 GSENAAKKFR EINQAYEILG NYRLRRLYDK GIVHTAGAQY AQDVHDVAEP VVEDDAETKF 120
  121 YKSRFQKSRV SDSAGRTPIY DFDEWSRNHY GKSFDRRQAA QAKYDRIKVQ RETNRISGQT 180
  181 DMVLLAFIFA GVAVYLMFLA ESSYDTPKQK AKERYRRDQE EREQKLVGKQ S

Type	Start	End	Confidence
Cytoplasmic	1	179	0.58
Transmembrane Helix	180	199	0.87
Non-Cytoplasmic	200	231	0.63