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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: wtrw-PA, wtrw-PB...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLGYKEGS TKPRRMTRSI SVVTKTEVEQ PLTENNANNR FKSIPPNLMV RWRNNTDAMI  60
   61 EAQYPTAGEF EYMECGPSPP AESAPSMYDS FEEPTSELSV QICNDTLRIS LIDQMKSAAG 120
  121 RVKLFEDIEQ SNVVAEGIRT HFESASKLEK NLCYLWAAYL KRWDLIESLL EAGADLHFCD 180
  181 QNGISALHLS AFSGCLATLG LLVAKGLNVN LQSKCYTPLH CAAFGNAAEA AKLLINNGAD 240
  241 ISKDTSKPNC EESLLHCAVR SNALECLQIF IAEGADVNSL KPNGTNAIHL AADLGNIQCL 300
  301 EALLNAPNAD ANVRICIREK ESTALHLAAD EGNVECVDLL LAKGADAKLK NHRGFTPLHL 360
  361 AARTSSLDCV ESLLRNGNAD ANAEDFDHRT PLHAAVGKSE NAYDIMETLI QWGANVNHKD 420
  421 IYGFTALHLA ALDGLVQCVE MLIFHGADVT TKSKKGTSAL NVITRKTPAS VAMIRQKLDA 480
  481 AITLHHSQDP VNREVELELD FRQLLQHCHP REISYLNTFV DEGQKEILEH PLCSSFLYIK 540
  541 WGKIRKYYIG RLIFCFSFVL FLTLYVLTAL AHNCYNGSKN DNTTIPAQEL CQKQSILGDM 600
  601 LRNNPFVMEM QWWVLVAITI VEIFRKLYGI TGYSSFRHYV TQVENIMEWF VITSVFVISY 660
  661 IYTNKTYTFQ NHIGAFAVLL GWTNLMLMIG QLPVFDVYVA MYTRVQGEFA KLFMAYSCML 720
  721 IGFTISFCVI FPSSSSFANP FMGFITVLVM MIGEQDLSLL INDPEGKDPP FLLEVSAQIT 780
  781 FVLFLLFVTI ILMNLLVGIA VHDIQGLKKT AGLSKLVRQT KLISYIESAL FNGYLPTWLR 840
  841 NLLHYTALVS PQAYRVVLCV KPLNPSEKRL PREILMKAYE VGKMRKHFGH TISSKNSAEN 900
  901 YLSYKNKYNN NNGATTGYVL PDSDPDAGQF TTLTTKIDDN ADRIEFLTQE IQELKQALIS 960
  961 QQQQASKVID KLLIVISNQQ KQNLRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle