YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Dpck-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIVAVTGGI ATGKSTISKV FERQGIPVID ADKIAREIVE PGQPCWRQIR EVFGDEVLLP  60
   61 SKEINRAVLG KMIFEDKELR GKLNKITHPT IHRKIFWQVC KLLVTGHAWI VLDLPLLFET 120
  121 GVLMDFIHKI VCVTCDSDKQ LERLIARNEL SESEARHRVD SQMPLDKKCE KSHFVIDNNG 180
  181 SVEEAESSAM SIYNLMRDSK QHWLNRISFL GLFLIVGFTI YMLLKVFNRL PESWQM

Type	Start	End	Confidence
Cytoplasmic	1	202	0.77
Transmembrane Helix	203	224	0.90
Non-Cytoplasmic	225	236	0.64