YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Edg84A-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVKTALFVT LIGLAQAGPL PAKSSGSEDT YDSHPQYSFN YDVQDPETGD VKSQSESRDG  60
   61 DVVHGQYSVN DADGYRRTVD YTADDVRGFN AVVRREPLSS AAVVVKPQAT AVVPKVQLKP 120
  121 LKKLPALKPL SQASAVVHRS FAPVVHHAPV THVVHHAAPA HSFVSHHVPV LKTTVHHAHH 180
  181 PHAISYVF

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	188	0.98