YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0297096, CG1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	39	0.98
Transmembrane Helix	40	62	0.89
Non-Cytoplasmic	63	89	0.95
Transmembrane Helix	90	109	0.95
Cytoplasmic	110	117	0.83
Transmembrane Helix	118	138	0.92
Non-Cytoplasmic	139	147	0.62
Transmembrane Helix	148	165	0.94
Cytoplasmic	166	174	0.81
Transmembrane Helix	175	195	0.92
Non-Cytoplasmic	196	201	0.83
Transmembrane Helix	202	222	0.91
Cytoplasmic	223	285	0.96
Transmembrane Helix	286	307	0.89
Non-Cytoplasmic	308	322	0.84
Transmembrane Helix	323	343	0.94
Cytoplasmic	344	350	0.91
Transmembrane Helix	351	373	0.91
Non-Cytoplasmic	374	389	0.82
Transmembrane Helix	390	410	0.91
Cytoplasmic	411	420	0.84
Transmembrane Helix	421	442	0.92
Non-Cytoplasmic	443	449	0.87
Transmembrane Helix	450	472	0.93
Cytoplasmic	473	491	0.98

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSISREEET GVQYSYTEVS TFQIREGNTR TMSPEPVKSG RIFMAAVAAN LSAFVVGTTL  60
   61 GWTSPIGPKL KSEDTSDSPL SRPITSDEDA WISSLIAVGA LVAPFVAGPM ADRIGRKWVL 120
  121 LSSSLFFVLA FGLNMVASEV WILYMSRLIQ GFGVGFVMTV QPMYVGEIST DNVRGATGSL 180
  181 MQLFIVGGIL YVYAIGPYVS YQALQWCCIV VPVVFDLVFY MMPESPYFFA GKGRKSEALK 240
  241 SLQFLRGQSA EGVHDEMAEI QANVEEAMAS KGTVMDLFKN AGNRRALFIC AGLISFQQLS 300
  301 GINVVLFNSQ SIFASANTGL DPAIATIIIG CVQVGSSALT PLVADRLGRK VMLLTSSSVM 360
  361 SIGLAALGAF FYMQLVKGDI SSVVWMPVPA LIIYNIVYCT GFGPLPWAVL GEMFPANIKS 420
  421 VASSVVASTC WTLGFLVTFF YPSLDALGSY YAFWLFAVCM VVAFFFVLFV VMETKGLSLQ 480
  481 QIQDRLNGKR N