YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG12171-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSFKDKVII VTGASSGIGA GTSVLLAKLG GLLTIVGRNL DKLNETAEQI VAAGGAPALQ  60
   61 VAADINSESD VQGIVSATLA KHGRIDVLVN NAGILELGSI ENTSLEQFDR VMNTNVRSLY 120
  121 QLTHLVTPEL IKTKGNIVNV SSVNGIRSFP GVLAYNVSKA AVDQFTRCVA LELAPKGVRV 180
  181 NSVNPGVIIT ELQRRGGLDQ EAYVKFLEHA KVTHALGRPG EVKEVAAAIA FLASDEASFS 240
  241 TGISLPVDGG RHAMCPR

Type	Start	End	Confidence
Signal Peptide	1	26	0.48
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	257	0.93