YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31547-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRFQISKV NGTANAGYDG EARSAESDQT DAAHPLPPTS NENHLHPKAS GETGENRRSS  60
   61 RLSFRGFGNF LRKSDAERKF SLAQLTKESL PRLDNYRISM RNLKRPSIGE LQGEAVDQSI 120
  121 TIPEPEPEAT GGHIKLGWIV GVLIPCLLNI WGVMLFLRLS WVVAESGILQ SLIIITISAV 180
  181 VCVITTLSLS AISTNGEVKG GGVYFIISRS LGPEFGASVG VVFAFANAVS ASMNTIGFCE 240
  241 SLNVLLKNND LKIVDNGIND IRIVGSITVL VLILICCVGM EWETKAQNFL IVTIVLAIFN 300
  301 FLIGAAIGPQ GNEEQISRGF VGFSWATLKE NFGSDYRYAE GVNHDFFSVF AIFFPSVTGI 360
  361 QAGANICGDL KDAGAAIPKG TFWSLLISMS SYALFVLFAG GAAVRDASGI PADLVNGTIV 420
  421 SSELPCMATG NCTWGLFNSY EMMQEMSLWG PLIYAGCFAA TLSTALTNLL SVPRLVQALG 480
  481 IDQIYPGLIF FSKPYGKHGE PYRGYVLTFF ITTGFLLIGE LNLIAPLIST FYLASYALIN 540
  541 FCTFHAAFVK PLGWRPTFKY YNAWLSLFGF AMCVAIMFLI NYVAAIITFG IIFALYLVVM 600
  601 YRKPEANWGS TTQAQQYKAA LMAVHRLQNV SDHVKNYHPQ VLVLSGDPKT RPPLVDFGYL 660
  661 LTKNNSLMFV ANIIPVRVGY KNRQHLVKDG QKYLDARKIK AFYNVIDGFS LEDGINALTK 720
  721 STGFGKMSPN IVLVGYKPDW NRCRKEEVES YFSILYNAFS QRMGVALLRL PNGLDFSELS 780
  781 SEVTLPANGM GHMHTANAHG FTNELMPAAN AASELLHIDS NLNLASMDSP NSSFTMPQPA 840
  841 PMPNMQRNSR SYKVTSSDEP AVTYHTKGGS DIPQNLLDAM TIFTRKQPKG TIDVFWLYDD 900
  901 GGLTILLPYI ISMRSHWQNS KLRVFAMCHG KDEEQEEKSM ASLLTKFRIK YSELIMLKGV 960
  961 SEQPRADTVL KHKRLIEPFR RGARNEFGIT DDELQSMSEK TNRQLRIHEL VVKHSSNASL1020
 1021 VVMSLPMPRK EAISAPLYMS WLEMLTSDMK CPVALARGNQ TPVLTLYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle