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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEK-PA
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDDLDGIVR HRRRSLSFLQ IVTLTMAGLV AFDPAQVLAG HPTTDSELQT AGSPRPPGLE  60
   61 HCVDQEERRV ARRLLYISTL DGRLSALDIA KSGKLRWSVP TGPGPLISSS IHRLELTNNG 120
  121 QFVRMIPSLS GGIYKFDGDS IDPIPITAEH LLSSSAKFSD DLVISGGKET RSYGVSVRTG 180
  181 QLLYECSLNG CVNSTEEGLA IDDTIREPDE EDQLEDGEQL RDEAGYIVRH DPLLDDVIIV 240
  241 RRQTQTVRAV ESRTGVERWN FSVGQHELDL VRPSECQLQP RDELELAVLD VDIKVVVPEG 300
  301 IICAFSKSEP QTMLWKYKFD HPIVSAWNTN ADDELQPIDL FSSAQWLWDQ DENDTELPNA 360
  361 PQSPPSIYLG MYDKQLYIQE SIRLRQEIMD QTKVYQQLTG DTSLMPRIPW KPISASSKSL 420
  421 VIFRKDQEDP EMIAEGAVAQ GGELVPYDDE NFAVAAQSVL NASEFVNGNG FYFYTTGDLN 480
  481 GPQECSTQNN PTDLPAITAP TSPTNATSEG TEATGNHSVN DDLGFSLDDI DAPVKVVILS 540
  541 LWFWWKEIVV IAFTSAVILN IFMGQRNQRV EREYLVIERH VPVQTAIEAT EASTQALLGP 600
  601 VVPMQRPGNR FSFPPGQANQ RTISESTTHS GEHYTSRFQS DFELMQCLGR GGFGVVFEAK 660
  661 NKLDENRYAI KRITLPNKES SRQRVLREAR TLASCEHHNI VRYFHSWTET PPTGWQEEED 720
  721 RKLLAHELST SIQIETPDDS TMPSLTEQLK EKRQQQLLSW VSDAANSTAC SHDFHLPGES 780
  781 SLKNIREEYD YDEEEDSLIE FRSESQSAAL RAEEEDDTDD DYEEDEEQQG DHEKRHRSSV 840
  841 SIDIHSASFD LKNINYSQHQ LVSNSFQIES VRPKSSGSDD ANDDNKARRK PLTLALAQNH 900
  901 NNNQNGSQPT PSSATILNGT VAKPSKVYLY IQMQLCRKES LRDWLRDNRS ETRAAHIGDI 960
  961 FHQIVDAVDY VHLKGLIHRD LKPSNIFFSQ DGQIKIGDFG LVTDMADIPN LVAKCGDQSG1020
 1021 LPSCARHTQQ VGTHLYMSPE QLLGQHYDYK VDIYSLGLIF FELHVYFSTE MERIKTLRSL1080
 1081 RDGQYPKDFA VNYPQQYDLL QQMLSAQPEQ RPQTKQLKSQ LRNILQLPHL LSEGQSEQAE1140
 1141 LAERARRLSR SRTFSSSSEP HQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle