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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24644220, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAMRHRPMA PPGQGPGAGT AGEHVDSDDN NFTDDESSPL THDIYGGSQR TIQETKGWDV  60
   61 FRDPPIKIET GSTANQECLE LTVKILKIFA YVITFIIVLT GGVIAKGTML FMTSQVRKDK 120
  121 KMEYCNKDLG RDKSFVVRLP EEERVAWIWA LLIAYALPEI GALIRSARIC FFKTFKVPKT 180
  181 GHFLFVWLME SLSAVGMALL MFVVLPQIDA IQGAMLTNCL CVVPGIFGLL SRTSKEGKRF 240
  241 VKVIIDLAAV AAQVTGLVIW PLLENRRELW VIPVACVMIS CGWWENYVSP QSPLGLVRAL 300
  301 GRIKEEMKYT RYFCHIFLSI WKILLFFTVT LLIYWAQGEE PGNLFAMYGD AFGPHKIIVY 360
  361 ELPAGLGGVL PDTLESANID TVDVDAAYNT VVYVLLLQIF GAYLCYIFGK FACKILIQGF 420
  421 SYAFPVSLTV PLSVTFLIAA CGIRIDDPCF FHDTIPDYLF FTSPSNFRFN NFVTEQMAWA 480
  481 WILWLLSQTW IALHIWTPKC ERLATTEKLF VQPMYSSLLI DQSMALNRRR DDQADVKTED 540
  541 LSEIEKEKGD EYYETISVHT DRSSAPNKPS IKSSDNITRI YSCATMWHET KDEMIEFLKS 600
  601 IMRMDEDQCA RRVAQKYLRV LDPDYYEFET HIFFDDAFEI SDHSDDDIQC NRFVKLLIAT 660
  661 MDEAASEIHQ TTIRLRPPKK YPTPYGGRLV WTLPGKTKFI THLKDKDRIR HRKRWSQVMY 720
  721 MYYLLGHRLM ELPISVDRKD AIAENTYLLT LDGDIDFKPN AVTLLVDLMK KNKNLGAACG 780
  781 RIHPVGSGPM VWYQLFEYAI GHWLQKATEH MIGCVLCSPG CFSLFRGKAL MDDNVMKKYT 840
  841 TRSDEARHYV QYDQGEDRWL CTLLLQRGYR VEYSAASDAY THCPEGFNEF YNQRRRWVPS 900
  901 TIANIMDLLA DAKRTIKIND NISLLYIFYQ MMLMGGTILG PGTIFLMLVG AFVAAFRIDN 960
  961 WTSFHYNIVP ILAFMFICFT CKSNIQLFVA QVLSTAYALI MMAVIVGTAL QLGEDGIGSP1020
 1021 SAIFLISMVG SFFIAACLHP QEFWCITCGL IYLLSIPSMY LLLILYSIIN LNVVSWGTRE1080
 1081 VVAKKTKKEL EAEKKAAEEA KKRVKQKSML SFLQSGIGDN GDEEGSVEFS LAGLFRCIFC1140
 1141 THGKTSDEKQ QLTSIAESLD TIKHRMDTIE SAVDPHGHHA SRHGRRRTTS SGSKDHHLLT1200
 1201 SVAEKSGDES DESDSDTSAE PKQERDFLTN PYWIEDPDVR KGEVDFLSST EIQFWKDLID1260
 1261 QYLYPIDNDP VEQARIAKDL KELRDSSVFA FFMINALFVL IVFLLQLNKD NIHVKWPFGV1320
 1321 RTNITYDEST QEARIASDLI ELRNKSVFAF FMANALFVLI VFLLQLNKDK LHIIWPLGVK1380
 1381 TNITYIEETS EVHISKEYLQ LEPIGLVFVF FFALILIIQF TAMLFHRFGT ISHILASTEL1440
 1441 NFCKKKSEDL TQDQLIDKHA VEIVKNLQRL QGIDGDYDND SGSGPDRIAR RKTIQNLEKA1500
 1501 RQPRRQIGTL DVAFKKRFLK LTADAENNPA TPILTRRLTM RAETIRALEV RKNSVMAERR1560
 1561 KSAMQTLGAK NEYGITTGAP INNNGALPNQ RSGRVSNAGI SIKDVFNVNG GGAEQIYGSN1620
 1621 GGGTINQGYE HVIDEDGDGN SLRLTTRNPH PHPHHQVSWG QNTNGGGGNG TGRL

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