YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Tim17b1-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEYGREPCP FRIVEDCGGA FAMGALGGGA FQAIKGFRNA PSGLGYRLSG GLAAVRARSG  60
   61 LVGGNFAVWG ATFSAIDCSL VYFRKKEDPW NAIISGATTG GILAARTGLT SMLSSALVGG 120
  121 ALLALIEGVG IVVSHYSADS YRQVSPVERQ QRYKQELLRQ QKGVSPLAAT YGEIDSSAL

Type	Start	End	Confidence
Cytoplasmic	1	16	0.76
Transmembrane Helix	17	34	0.82
Non-Cytoplasmic	35	59	0.70
Transmembrane Helix	60	83	0.75
Cytoplasmic	84	89	0.77
Transmembrane Helix	90	109	0.76
Non-Cytoplasmic	110	115	0.55
Transmembrane Helix	116	136	0.85
Cytoplasmic	137	179	0.72