YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Tim17a2-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYNRQPCPI RIVEDCGCAF MMGTMGGSLF QYLKGFRNAP SGLRRGLHGG IESVRLRTPA  60
   61 IAGSFAIWGA TFSTVDCVMV SYRQREDSWN AIVSGAATGG ILAARNGIRA MANSAFVGCL 120
  121 VLAMLEGAGA AVATIYASDG GVKAEESLIT VDQQMQRPQW ETSVADSNLT GAELERVLDE 180
  181 CRAYRAHNKM QQPMRSDAVE GKELGQLMKP MHSLVDLVKL AEIV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.78
Transmembrane Helix	12	33	0.62
Non-Cytoplasmic	34	57	0.58
Transmembrane Helix	58	80	0.76
Cytoplasmic	81	87	0.56
Transmembrane Helix	88	108	0.70
Non-Cytoplasmic	109	113	0.46
Transmembrane Helix	114	137	0.81
Cytoplasmic	138	224	0.56