YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0306977
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	22	0.65
Transmembrane Helix	23	44	0.80
Non-Cytoplasmic	45	156	0.66
Transmembrane Helix	157	176	0.77
Cytoplasmic	177	183	0.62
Transmembrane Helix	184	203	0.77
Non-Cytoplasmic	204	207	0.67
Transmembrane Helix	208	230	0.69
Cytoplasmic	231	240	0.70
Transmembrane Helix	241	261	0.73
Non-Cytoplasmic	262	268	0.63
Transmembrane Helix	269	288	0.91
Cytoplasmic	289	354	0.98
Transmembrane Helix	355	376	0.90
Non-Cytoplasmic	377	386	0.88
Transmembrane Helix	387	410	0.89
Cytoplasmic	411	415	0.95
Transmembrane Helix	416	437	0.90
Non-Cytoplasmic	438	447	0.87
Transmembrane Helix	448	474	0.77
Cytoplasmic	475	489	0.83
Transmembrane Helix	490	509	0.90
Non-Cytoplasmic	510	515	0.63
Transmembrane Helix	516	535	0.88
Cytoplasmic	536	612	0.95

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTKVDAVGQ ITGPWGKWQL RTVLLIFLCK IPSSWFMACI IFTAPAPRHG EFFCKPPHTI  60
   61 GAQNQTQWIK VSHPQKEESD DQEFSIDFCN VYQDAQEHAH HYYNYENSDQ EPRVWEKPLH 120
  121 RNSNVIPCTE FQHESDYHSV VTQYDLVCSR DILVSVTQFF HLFGVLTGGI LANQLLKYFS 180
  181 PRNVMLFGMI TQIFCGNLTG HVASYELHVF FRCLSAVCCA QMYTAGGQIM ADITGGKYRT 240
  241 CVSTLFEQFW SIGVMMLPGV ASFWSSWSHL YMAISWPTVI LIYLWQWIPD SPRWLIARGR 300
  301 TQDAKKILLE CVEVNGTGYN LPHDIDQQLE LQAQTAMDAP PPSGWWSMWK GERAVRHIVC 360
  361 VHLAWSLYIV VYYGMLLNIR SFSRDHLYIN TFFAGFSEMM GTFFGLFLIL KTTRKWLWTG 420
  421 LFNIVAGCIA YCGWLVPKPS VIGLDPNVAL LMCSAMVSKM AISTTLSILT TCTVELVSDD 480
  481 KKKITSFSTI CWARFWLLGA PFIGSTVVFG QLIPQTAFAS LAILGGLCTS LISSPRTHPI 540
  541 SRPSSPAAQG TQNITSQFTI IDGMDNKGYS PTSKTIHSNS TILKLNTPQS NLPPQLMPGI 600
  601 WTTKITEDGP PM