YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0307412, CG3...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIMKYIDS ISRYMDSHSD SRTKGWPMMS SPFPTLAVCL TYVYLVKVLG PRLMENRKPL  60
   61 NLQNTLVMYN AIQVVFSAWL FYECLMGGWW GSYSFRCQPV DYTDSPTSRR MVHACWWYYF 120
  121 SKFTEFMDTI FFVLRKKSSQ VTTLHVIHHG CMPMSVWFGV KFTPGGHSTF FGLLNTFVHI 180
  181 VMYTYYMFSA MGPQYQKYLW WKKYLTTLQM VQFILIMVHA FQLLFIDCNY PKAFVWWIGM 240
  241 HAVMFFFLFN EFYKAAYRSR MMKKNGALAN GHAKPNGYCK SINAHDDLAM PQTTEATATA 300
  301 TPASKANGSS TPPSNGHANG VENVYKQVAN GSAHKGSNGG LSNGYATKLL DDASQELKQR 360
  361 KTPK

Type	Start	End	Confidence
Non-Cytoplasmic	1	27	0.69
Transmembrane Helix	28	46	0.81
Cytoplasmic	47	65	0.65
Transmembrane Helix	66	85	0.85
Non-Cytoplasmic	86	166	0.59
Transmembrane Helix	167	188	0.88
Cytoplasmic	189	204	0.87
Transmembrane Helix	205	226	0.90
Non-Cytoplasmic	227	232	0.95
Transmembrane Helix	233	253	0.94
Cytoplasmic	254	364	0.99