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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Gel-PD, Gel-PB, ...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDASGAATMA VLSSLLVFLA LSSSLCSAGT LNARPAFPVQ SGEIQPSGQN SKQAARRVMH  60
   61 PSFANAGRTP GLEIWRIENF EPVIYPKTNY GKFYTGDSFI VLNTIENKKD KKLSWDVHFW 120
  121 LGLETSTDEA GAAAILTVQL DDLLNGGPVQ HREVQDHESQ LFLSYFKNGI RYEQGGVGTG 180
  181 FKHVETNAQG ETRLFQVKGK RNVRVRQVNL SVSSMNTGDC FILDAGSDIY VYVGSQAKRV 240
  241 EKLKAISAAN QIRDQDHNGR ARVQIVDDFS TDADKQHFFD VLGSGSADQV PDESTADEDS 300
  301 AFERTDAAAV SLYKVSDASG KLKVDIIGQK PLTQAMLDTR ECFILDTGSG IFVWVGKGAT 360
  361 QKEKTDAMAK AQEFLRTKKY PAWTQIHRIV EGSESAPFKQ YFDTWRDAGM SHSRLIRSAL 420
  421 GIGSDELLND DEIDSVVTQL KKSGGRAFGF MPDHGQNVIE TITQYVAKPG SDEIVVSTVP 480
  481 FDEKLPLLGF ASYVLTYNYE ANNGDTGSLT YVWHGVKASA AARKRAFEEG LVGSKDGLLV 540
  541 QTNQGHEPRH FYKIFKGKLL TSFTALPVTA QLFRIRGTVE SDVHASEVAA DSSSLASSDA 600
  601 FVLHSGKSHK IYIWNGLGAS AFEKQAAVDR FSDYWDDVEL EQVEEGAEPD EFWEELNGEG 660
  661 QYDRSLGDDG APLLESRLFH CHLSSGGFLK VEEVAQYEQE DLDSDDIMLL DAGDEIYLWV 720
  721 GYGVSEEENG KLLDTAKLYF NLEPTARSFD TVSIIRVPQG KEPRVFKRMF PNWDDNYWQN 780
  781 QPSYEDMKQL VIDANNEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle