YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11137-PA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKQNPKKL KWALDFNGSK NADIPSPLGY NPSALVNQSE VVRDQRLVIK KSWDLALGPL  60
   61 KNIPMNLFIM YMSGNSISIF PIMMVGMMLI RPIKAIFTTQ VTSKMAEGAQ GTGQRIVYFL 120
  121 GNLANVALAL YKCQSMGLLP THASDWLAFV QPQTRLEYYG GGISFV

Type	Start	End	Confidence
Cytoplasmic	1	66	0.58
Transmembrane Helix	67	90	0.85
Non-Cytoplasmic	91	166	0.49