YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11438-PA, FBpp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYSKLARG FCDLLIWVAL SVASVLLHKM GRPFRRGFFC GDETLSYPAR DGTISSKVII  60
   61 AIVLGVPNAV IVVVELFRQL PGGPLREAGG KRDSCRIAHR LGVLYRQVIF YLYGLAMVTF 120
  121 TTMLTKLCLG RLRPHFLAVC QPMLPDGSSC QDAQNLGRYI DSFTCSNANM TDYQFKELYQ 180
  181 SFPSGHASMA MYAMLYLAIY LQAALSTRVS KLLKHLLQFL FVMFGWYVSL TRIIDYYHHW 240
  241 SDVLAGAALG VVFAWLTSAY VADLFAGKRW PKTGYSANTL RKPQVSPKSS TKSQAGGSTS 300
  301 GAGQPPALPA YTFGTLPYLA AHPAQAQAQY AQPYHNYGYV P

Type	Start	End	Confidence
Cytoplasmic	1	9	0.84
Transmembrane Helix	10	29	0.91
Non-Cytoplasmic	30	57	0.84
Transmembrane Helix	58	77	0.89
Cytoplasmic	78	107	0.82
Transmembrane Helix	108	127	0.86
Non-Cytoplasmic	128	184	0.93
Transmembrane Helix	185	204	0.87
Cytoplasmic	205	214	0.78
Transmembrane Helix	215	234	0.91
Non-Cytoplasmic	235	242	0.79
Transmembrane Helix	243	264	0.91
Cytoplasmic	265	341	0.96