YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fbl-PD, fbl-PC
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPWFGMDIGG TLTKLVYFEP KDITPDEQDR EAGILRNIRR YLTKNSAYGK TGHRDTHLQM  60
   61 DNVEIRKRRG SLHFIRFQTT DMGNFLSLAK QKGMAELVTT VCATGGGAFK FEQDFRDQVN 120
  121 MKLAKFDELD TLIKGILFAD LHNRTECYYY ENARDILKSE KQQFNFSQPF PFILVNVGSG 180
  181 VSILAVYGPD NYKRISGTSL GGGTFLGLCC LLTGCTSFEE AIQLATKGDN RKVDKLVKDI 240
  241 YGGDYNRFGL PGDLVASSFG QMHLNDKRVS VSREDLANAT LVTITNNIGS IARMCALNEK 300
  301 IDRVVFVGNF LRVNPISMKL LAYAMEFWSN GTMKGLFLEH EGYFGALGCL LQFNGELAAA 360
  361 LNDGVEHSIH TESDSASEAA QTSSTADEPP EKAPTSKHST R

Type	Start	End	Confidence
Non-Cytoplasmic	1	168	0.66
Transmembrane Helix	169	188	0.67
Cytoplasmic	189	194	0.37
Transmembrane Helix	195	216	0.59
Non-Cytoplasmic	217	401	0.65