YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fbl-PA
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEALHFTSI FDLIIKSAMP WFGMDIGGTL TKLVYFEPKD ITPDEQDREA GILRNIRRYL  60
   61 TKNSAYGKTG HRDTHLQMDN VEIRKRRGSL HFIRFQTTDM GNFLSLAKQK GMAELVTTVC 120
  121 ATGGGAFKFE QDFRDQVNMK LAKFDELDTL IKGILFADLH NRTECYYYEN ARDILKSEKQ 180
  181 QFNFSQPFPF ILVNVGSGVS ILAVYGPDNY KRISGTSLGG GTFLGLCCLL TGCTSFEEAI 240
  241 QLATKGDNRK VDKLVKDIYG GDYNRFGLPG DLVASSFGQM HLNDKRVSVS REDLANATLV 300
  301 TITNNIGSIA RMCALNEKID RVVFVGNFLR VNPISMKLLA YAMEFWSNGT MKGLFLEHEG 360
  361 YFGALGCLLQ FNGELAAALN DGVEHSIHTE SDSASEAAQT SSTADEPPEK APTSKHSTR

Type	Start	End	Confidence
Non-Cytoplasmic	1	186	0.69
Transmembrane Helix	187	206	0.68
Cytoplasmic	207	212	0.40
Transmembrane Helix	213	234	0.59
Non-Cytoplasmic	235	419	0.68